{ "_id": "6a1e96811d7bb097a0a6c7f6", "Package": "ipADMIXTURE", "Title": "Iterative Pruning Population Admixture Inference Framework", "Version": "0.1.2", "Authors@R": "person(given = \"Chainarong\",\nfamily = \"Amornbunchornvej\",\nrole = c(\"aut\", \"cre\"),\nemail = \"grandca@gmail.com\",\ncomment = c(ORCID = \"0000-0003-3131-0370\"))", "Description": "A data clustering package based on admixture ratios (Q\nmatrix) of population structure. The framework is based on\niterative Pruning procedure that performs data clustering by\nsplitting a given population into subclusters until meeting the\ncondition of stopping criteria the same as ipPCA, iNJclust, and\nIPCAPS frameworks. The package also provides a function to\nretrieve phylogeny tree that construct a neighbor-joining tree\nbased on a similar matrix between clusters. By given multiple Q\nmatrices with varying a number of ancestors (K), the framework\ndefine a similar value between clusters i,j as a minimum number\nK* that makes majority of members of two clusters are in the\ndifferent clusters. This K* reflexes a minimum number of\nancestors we need to splitting cluster i,j into different\nclusters if we assign K* clusters based on maximum admixture\nratio of individuals. The publication of this package is at\nChainarong Amornbunchornvej, Pongsakorn Wangkumhang, and\nSissades Tongsima (2020) .", "URL": "https://github.com/DarkEyes/ipADMIXTURE", "BugReports": "https://github.com/DarkEyes/ipADMIXTURE/issues", "Language": "en-US", "License": "GPL-3", "Encoding": "UTF-8", "LazyData": "true", "VignetteBuilder": "knitr", "RoxygenNote": "7.3.2", "Config/pak/sysreqs": "cmake libglpk-dev make libuv1-dev libxml2-dev\nzlib1g-dev", "Repository": "https://darkeyes.r-universe.dev", "Date/Publication": "2025-05-07 09:27:19 UTC", "RemoteUrl": "https://github.com/darkeyes/ipadmixture", "RemoteRef": "HEAD", "RemoteSha": "efcc3b14913a753e0ef01d8babaac79646634c5a", "NeedsCompilation": "no", "Packaged": { "Date": "2026-06-02 08:34:41 UTC", "User": "root" }, "Author": "Chainarong Amornbunchornvej [aut, cre] (ORCID:\n)", "Maintainer": "Chainarong Amornbunchornvej ", "MD5sum": "7e4470e663d384de2213670dd817c35f", "_user": "darkeyes", "_type": "src", "_file": 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